PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0144s0031.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family AP2
Protein Properties Length: 511aa    MW: 56936.7 Da    PI: 5.8888
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0144s0031.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.11.2e-091757348
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                         ykGV+++k++g+W+A ++       +++++lg   +a eAa+a+++
  Mapoly0144s0031.1.p 17 YKGVTFYKRTGKWEANLWFE-----NQQHYLGASFSALEAARAYDK 57
                         9***************9996.....699999999999*******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.0E-81678IPR001471AP2/ERF domain
PROSITE profilePS5103211.7461672IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-91774IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.5E-81773IPR001471AP2/ERF domain
PfamPF008471.7E-41756IPR001471AP2/ERF domain
PROSITE profilePS510328.729110171IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-5112164IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MGRRAGGRKC ARVQGPYKGV TFYKRTGKWE ANLWFENQQH YLGASFSALE AARAYDKGIL  60
FTRSSTEQLN FDRSNYKEDI QKMRGMSFLA YRQFLRDTSK KADCILMCKS SKGILIDANG  120
KWEVKYCSKN HQHKSQYTLV GWFDTEEEAV RAYNETALQH GDERAIVRSF FKKKTGYARV  180
ASPTRDDSGT TIENTERTLT LAHPASNNSH SSKEEVTSAS HPRASCWERA TDASKRVASG  240
SMEACARDDK NDDTEMHDAS VNVPVLPQQT DGSSLSDPDE LEGTHRGTIL SSNGSKGLLQ  300
MNDAAAGPSN IPEEIDPPNP SNPAPHKDAH PSNPDPCEDA HRDEMGSFSR SSGMLQENHL  360
HSSRPNDFEQ SQHHEDGRSC TVHSDAVLLN VCRMQNIWGG SVLMNIYRMQ TEGGDPVILS  420
FLQHEGYNHL QIQEECQGRS QFTESDRALQ CVDGESTPFN FFPGGTPLDY SLEVRTFEFF  480
PAEALSSDNQ DVSGLTHLKR EGPFDVDLTL *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP4971784
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.15e-17AP2 family protein